机器学习及其在农业中应用研究的展望

机器学习是一种面向机器的数据分析方法,自动化机器学习的研究促进了人工智能的发展。大数据的快速积累,促进了机器学习算法的井喷式发展。如何选择合适的机器学习算法解决行业问题,成为了当前应用的难点。笔者整理了机器学习新材料,对各种机器算法的特点和算法之间的差异,进行了仔细的梳理,总结了各种算法的需求背景和优缺点,以及主要的应用场合。在此基础上,分析了机器学习在农业应用的案例,综述了机器学习在农业应用,指出了目前存在的发展瓶颈,并提出了进一步研究应用的建议。     

蛋白质激发子Hrip1对小麦黄矮病的诱抗作用

小麦黄矮病是由大麦黄矮病毒（barley yellow dwarf virus，BYDV）引起的一种小麦病毒病，其传播介体是小麦蚜虫，在小麦生产中造成巨大的经济损失。近年来，植物诱导抗性作为一种新兴的植物病虫害防治措施引起了广泛的关注。蛋白质激发子Hrip1可以激活多种植物的免疫防御反应诱导植物产生广谱抗性。本研究评价了Hrip1对小麦黄矮病的诱抗效果。用30 μg/mL的Hrip1溶液进行小麦浸种和幼苗喷雾，随后接种BYDV，接种后第14 d，Hrip1对小麦黄矮病控制效果在50%以上，接种后第21 d控制效果仍在30%以上。实时荧光定量PCR检测结果显示，在Hrip1处理的小麦幼苗体内，BYDV外壳蛋白mRNA的数量显著低于对照组；EPG结果显示，在Hrip1处理的小麦幼苗上，麦二叉蚜寻找叶片刺吸位点和韧皮部取食位点的时间增加。以上结果表明：Hrip1能够有效地抑制BYDV在小麦体内的增殖；影响传毒媒介麦二叉蚜的取食行为，抑制其传毒能力。此外，Hrip1处理小麦能有效缓解BYDV引起的叶片黄化和植株矮化的症状。因此，Hrip1可以作为生物诱导剂综合控制小麦黄矮病。     

The M43 domain-containing metalloprotease RcMEP1 in Rhizoctonia cerealis is a pathogenicity factor during the fungus infection to wheat

Wheat(Triticum aestivum L.) is an important staple crop for global human. The necrotrophic fungus Rhizoctonia cerealis is the causal pathogen of sharp eyespot, a devastating disease of wheat. Herein, we identified RcMEP1, a zinc metalloproteaseencoding gene from R. cerealis genomic sequences, and characterized its pathogenesis function. RcMEP1 expressed at markedly-high levels during R. cerealis infection process to wheat. The predicted protein RcMEP1 comprises of 287 amino acid residues and contains a signal peptide and a M43 metalloprotease domain harboring the active site motif(HEVGHWLGLYH). The assays of Agrobacterium tumefaciens-mediated transient expression in Nicotiana benthamiana leaves indicated that RcMEP1 is an apoplastic elicitor of cell death, and that the predicted signal peptide functions and is required for secretion and cell death-induction. The purified RcMEP1 protein and its M43 domain peptide were individually able to induce plant cell death and H2 O2 accumulation, and to inhibit expression of host chitinases when infiltrated into wheat and N. benthamiana leaves, while the M43 domain-deleting peptide and negative control lacked the capacity. Moreover, compared with the control pretreatment, the purified RcMEP1 protein or its M43-domain peptide resulted in enhanced pathogenesis in the inoculated wheat, whereas the M43 domain-deleting peptide failed. These results suggest that RcMEP1 acted as an important pathogenicity factor during R. cerealis infection to wheat and that its signal peptide and M43 domain are required for the secretion and pathogenesis of RcMEP1. This study provides insights into pathogenesis role of M43 domain-containing metalloproteases during R. cerealis infection to wheat.     

Effect of dietary calcium or phosphorus deficiency on bone development and related calcium or phosphorus metabolic utilization parameters of broilers from 22 to 42 days of age

This experiment was conducted to investigate the effect of dietary calcium (Ca) or phosphorus (P) deficiency on bone development and related Ca or P metabolic utilization parameters of broilers from 22 to 42 days of age based on our previous study, which indicated that dietary Ca or P deficiency impaired the bone development by regulating related Ca or P metabolic utilization parameters of broilers from 1 to 21 days of age. A total of 504 one-day-old Arbor Acres male broilers were randomly assigned to 1 of 4 treatments with 7 replicates in a completely randomized design, and fed the normal control and Ca- or P-deficient diets from 1 to 21 days of age. At 22 days of age, the broilers were further fed the normal control diet (0.90% Ca+0.35% non-phytate P (NPP)), the P-deficient diet (0.90% Ca+0.18% NPP), the Ca-deficient diet (0.30% Ca+0.35% NPP) or the Ca and P-deficient diet (0.30% Ca+0.18% NPP), respectively. The results showed that dietary Ca or P deficiency decreased (P<0.05) tibia bone mineral density (BMD), bone breaking strength (BBS), ash content, tibia ash Ca content and serum P content on days 28 and 42, but increased (P<0.05) tibia alkaline phosphatase (ALP) activity of broilers on day 42 compared with the control group. Furthermore, the broilers fed the P-deficient diet had the lowest (P<0.05) tibia BMD, BBS, ash content, serum P content and the highest (P<0.05) serum Ca content on day 28 compared with those fed the Ca-deficient or Ca and P-deficient diets. The results from the present study indicated that the bone development and related Ca or P metabolic utilization parameters of broilers were the most sensitive to dietary P deficiency, followed by dietary Ca deficiency or Ca and P-deficiency; dietary Ca or P deficiency impaired the bone development possibly by regulating serum Ca and P contents as well as tibia Ca content and ALP activity of broilers from 22 to 42 days of age.     

翠竹及菲白竹LEA3同源基因的克隆及序列分析

竹类植物在中国有着非常悠久的栽培历史,并被广泛应用于园林、造林、庭院以及食品等行业。本研究以翠竹和菲白竹为材料提取其叶片总DNA,采用PCR方法获得翠竹SpLEA3基因与菲白竹SfLEA3-1、SfLEA3-2基因;其中SpLEA3全长804 bp,编码195个氨基酸,GC含量为68.4%;SfLEA3-1全长803 bp,编码195个氨基酸,GC含量为68.2%;SfLEA3-2全长557 bp,编码144个氨基酸,GC含量为67.8%。通过ProtParamy等生物软件分析,SpLEA3、SfLEA3-1和SfLEA3-2与贵州悬竹LEA3基因同源性高达61%以上,且3个基因编码蛋白均属于亲水性蛋白。源自2个竹种LEA3基因均包含一个完整的开放阅读框,其编码的氨基酸含有4~6个由11个氨基酸组成的保守基元序列。本研究不仅为深入了解竹类植物抗旱的分子机理研究提供了基础数据,也为竹类植物的抗旱育种后续研究提供了科学依据。     

明胶骨原料碳、氮稳定同位素的地域性差异研究

为探讨不同地域来源的明胶骨原料中碳、氮稳定同位素的分布特征及其相关性,本试验采用元素分析-稳定同位素比率质谱仪测定了广西、内蒙古和山东3个主产区的牛骨样品及当地牧草饲料样品中的¹³C和¹⁵N同位素组成,并结合线性回归讨论了牛骨样品中δ¹³C和δ¹⁵N值的相关性与牛食谱组成的关系。结果表明,广西地区骨样品中δ¹³C和δ¹⁵N值的相关性较好(R²=0.401 8),而内蒙古和山东地区骨样品中δ¹³C和δ¹⁵N值的相关性较差(R²<0.1),反映了3地牛食物的来源稳定性及主要成分存在明显差异,对各地牛食谱结构推测的结果与实际牧草饲料样品中δ¹³C和δ¹⁵N值的地区分布规律也较为一致。本研究初步揭示了明胶骨原料中碳、氮稳定同位素产生地域性差异的原因,不仅为动物生态学研究提供了有益信息,更为动物制品产地溯源研究提供了新思路。     

动态高压微射流对乌贼墨黑色素物理性质及微观结构的影响

为改善乌贼墨黑色素在食品中的应用性能,以虎斑乌贼(Sepia pharaonis)墨囊为原材料,采用碱性蛋白酶酶解制备乌贼墨黑色素,研究不同动态高压微射流(DHPM)(0、40、80、120、160、200 MPa)均质对其物理性质的影响,并采用红外光谱、扫描电子显微镜分析其微观结构。结果表明,DHPM处理使乌贼墨黑色素聚集体解聚,浊度增加、平均粒径减小,粒度分布更加集中和细微化,同时改善了其在去离子水和生理盐水中的溶解性;在压力作用下表现为粘度、空间色度值均有所增大;差示扫描量热法(DSC)分析表明,乌贼墨黑色素在120 MPa下热变性温度为90.70℃,焓变值为0.45 J·g^-1,且该压力下其贮藏稳定性最好;红外光谱分析表明,在特定压力处理范围内,DHPM处理使乌贼墨黑色素分子间形成了较强的氢键;扫描电镜观察发现样品颗粒在120 MPa处理后颗粒尺寸最小。因此,DHPM改性技术改善了乌贼墨黑色素的物理性质和微观结构,为其在食品工业中的应用提供了理论依据。     

多效唑对杂交中稻不同密肥群体产量和抗倒伏性的影响

为探究高产稻田中防止倒伏发生的早期诊断技术,2015-2016年,以大面积推广的杂交中稻高产新品种蓉18优1015为试验材料,设计3因素完全因子试验,研究不同密肥群体下喷施多效唑对稻谷产量和抗倒伏性的影响。结果表明,随着施氮量和移栽密度的增加,稻谷产量提高,植株抗倒力下降,以施氮量150 kg·hm^-2和移栽密度18.75 万穴·hm^-2的产量较高。不同密肥群体下施用多效唑对产量和植株抗倒伏性有显著影响,施用多效唑后植株抗倒力增强,但产量因穗粒数下降而减少。不同密肥处理下施用多效唑对产量影响各异。于水稻最高苗期施用多效唑使植株重心高度、弯曲力矩、倒伏指数显著降低,折断弯矩则明显提高,穗粒数平均减少5.24~7.87粒。多效唑对产量的影响表现为低施氮量下因穗粒数减少而减产;中施氮量下产量差异不显著;高施氮量下植株未倒伏、籽粒灌浆结实正常,因结实率和千粒重高而增产。综上所述,肥力水平和施氮量高的稻田于最高苗期施用多效唑有利于水稻产量提高和控制后期倒伏。本研究为指导大面积水稻高产稳产提供了科学依据。